<?xml version="1.0" encoding="utf-8" standalone="yes"?>
<TEI xmlns="http://www.tei-c.org/ns/1.0">
  <teiHeader>
    <fileDesc>
      <titleStmt>
        <title type="main" level="a">Isolation and molecular characterization of Fusarium species (Fungi, Ascomycota) from unhatched eggs of Caretta caretta in Tuscany (Italy)</title>
        <author>
          <persName n="1" ref="https://orcid.org/0000-0002-6232-3775" type="ORCID">
            <forename>Samuele</forename>
            <surname>Risoli</surname>
            <placeName type="affiliation">University of Pisa, Italy</placeName>
          </persName>
          <persName n="2" ref="https://orcid.org/0000-0002-7080-8369" type="ORCID">
            <forename>Sabrina</forename>
            <surname>Sarrocco</surname>
            <placeName type="affiliation">University of Pisa, Italy</placeName>
          </persName>
          <persName n="3">
            <forename>Giuliana</forename>
            <surname>Terracciano</surname>
            <placeName type="affiliation">Istituto Zooprofilattico Sperimentale, Italy</placeName>
          </persName>
          <persName n="4" ref="https://orcid.org/0000-0002-5878-1159" type="ORCID">
            <forename>Riccardo</forename>
            <surname>Baroncelli</surname>
            <placeName type="affiliation">University of Bologna, Italy</placeName>
          </persName>
          <persName n="5" ref="https://orcid.org/0000-0003-1710-9929" type="ORCID">
            <forename>Marco Alberto Luca</forename>
            <surname>Zuffi</surname>
            <placeName type="affiliation">University of Pisa, Italy</placeName>
          </persName>
          <persName n="6" ref="https://orcid.org/0000-0002-7322-1985" type="ORCID">
            <forename>Cecilia</forename>
            <surname>Mancusi</surname>
            <placeName type="affiliation">ARPAT, Italy</placeName>
          </persName>
          <persName n="7" ref="https://orcid.org/0000-0002-8228-0258" type="ORCID">
            <forename>Cristina</forename>
            <surname>Nali</surname>
            <placeName type="affiliation">University of Pisa, Italy</placeName>
          </persName>
        </author>
        <respStmt>
          <resp>This is a section of <title>Ninth International Symposium “Monitoring of Mediterranean Coastal Areas: Problems and Measurement Techniques”</title>(DOI: <idno type="DOI">10.36253/979-12-215-0030-1</idno>) by </resp>
          <name>Laura Bonora, Donatella Carboni, Matteo De Vincenzi, Giorgio Matteucci</name>
        </respStmt>
      </titleStmt>
      <publicationStmt>
        <publisher>Firenze University Press</publisher>
        <pubPlace>Firenze</pubPlace>
        <date when="2022">2022</date>
        <idno type="DOI">https://doi.org/10.36253/979-12-215-0030-1.71</idno>
        <availability>
          <p>Available for academic research purposes</p>
          <p>Open Access</p>
          <p>Copyright Author(s)</p>
          <licence source="text" target="https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode">
            <p>Content licence CC BY-NC-SA 4.0</p>
          </licence>
          <licence source="metadata" target="https://creativecommons.org/publicdomain/zero/1.0/legalcode">
            <p>Metadata licence CC0 1.0</p>
          </licence>
        </availability>
      </publicationStmt>
      <sourceDesc>
        <p>This is original content, published for academic research purposes</p>
      </sourceDesc>
    </fileDesc>
    <encodingDesc>
      <appInfo>
        <application version="2.2" ident="Booksflow">
          <desc>Digital edition XML powered by Booksflow</desc>
        </application>
      </appInfo>
    </encodingDesc>
    <profileDesc>
      <abstract xml:lang="en">
        <p>Caretta caretta is the only sea turtle species nesting along the Tuscan coastline, where nests are becoming more numerous and widespread, as well as the number of Sea Turtle Egg Fusariosis (STEF)-affected eggs. In this work, we analyzed eggs from natural nests of C. caretta that showed visual symptoms of STEF from Tuscan nests, with the aim to (i) isolate Fusarium spp. strains present in unhatched eggs, (ii) morphologically and molecularly characterize the isolated fungi and, finally, (iii) reconstruct the phylogenetic relationships between our isolates and those already known.</p>
      </abstract>
      <textClass>
        <keywords>
          <list>
            <item>Emerging infectious diseases</item>
            <item>Sea Turtle Egg Fusariosis</item>
            <item>Fusarium Solani Species Complex</item>
            <item>Fusarium</item>
            <item>Caretta caretta</item>
          </list>
        </keywords>
      </textClass>
    </profileDesc>
  </teiHeader>
  <text>
    <body>
      <p>It is available online at https://doi.org/10.36253/979-12-215-0030-1.71<ref target="https://doi.org/10.36253/979-12-215-0030-1.71" /></p>
      <div>
        <listBibl>
          <head>References</head>
          <bibl n="102505">
            <bibl>Summerell, B. A. (2019). Resolving Fusarium: current status of the genus. Annu. Rev. Phytopathol. 57, 323 - 339</bibl>
            <idno type="DOI">10.1146/annurev-phyto-082718-100204</idno>
          </bibl>
          <bibl n="101474">
            <bibl>Dean R., van Kan J. A. L., Pretorius Z. A., Hammond-Kosack K. E., di Pietro A., Spanu P. D., Rudd J. J., Dickman M., Kahmann R., Ellis J., Foster, G. D. (2012) - The Top 10 fungal pathogens in molecular plant pathology. Mol. Plant Pathol. 13, 414 - 430</bibl>
            <idno type="DOI">10.1111/j.1364-3703.2011.00783.x</idno>
          </bibl>
          <bibl n="101806">
            <bibl>D’Mello, J. P. F., Placinta C. M., Macdonald A. M. C. (1999) - Fusarium mycotoxins: a review of global implications for animal health, welfare and productivity. Anim. Feed Sci. Technol. 80, 183 - 205</bibl>
            <idno type="DOI">10.1016/S0377-8401(99)00059-0</idno>
          </bibl>
          <bibl n="101691">
            <bibl>Sarrocco S., Mauro A., Battilani P. (2019): Use of Competitive Filamentous Fungi as an Alternative Approach for Mycotoxin Risk Reduction in Staple Cereals: State of Art and Future Perspectives. Toxins 11, 701 - 701</bibl>
            <idno type="DOI">10.3390/toxins11120701</idno>
          </bibl>
          <bibl n="101391">
            <bibl>Zhang N., O’Donnell K., Sutton D. A., Nalim F. A., Summerbell R. C., Padhye A. A., and Geiser D. M., (2006) - Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment. J. Clin. Microbiol. 44, 2185 - 2190</bibl>
            <idno type="DOI">10.1128/jcm.00120-06</idno>
          </bibl>
          <bibl n="101674">
            <bibl>Short D. P. G., O’Donnell K., Zhang N., Juba J. H., Geiser D. M. (2011): Widespread occurrence of diverse human pathogenic types of the fungus Fusarium detected in plumbing drains. J. Clin. Microbiol. 49, 4264 - 4272</bibl>
            <idno type="DOI">10.1128%2FJCM.05468-11</idno>
          </bibl>
          <bibl n="101871">
            <bibl>Fisher M. C., Henk D. A., Briggs C. J., Brownstein J. S., Madoff L. C., McCraw S. L.,  Gurr S. J., (2012) - Emerging fungal threats to animal, plant and ecosystem health. Nature 484, 186 - 194</bibl>
            <idno type="DOI">10.1038/nature10947</idno>
          </bibl>
          <bibl n="102113">
            <bibl>Sandoval-Denis M., Crous P. W. (2018). Removing chaos from confusion: assigning names to common human and animal pathogens in Neocosmospora. Persoonia  41, 109 - 129</bibl>
            <idno type="DOI">10.3767%2Fpersoonia.2018.41.06</idno>
          </bibl>
          <bibl n="101248">
            <bibl>Groner M. L., Maynard J., Breyta R., Carnegie R. B., Dobson A., Friedman C. S., Froelich B., Garren M., Gulland F. M. D., Heron S. F., Noble R. T., Revie C. W., Shields J. D., Vanderstichel R., Weil E., Wyllie-Echeverria S., Harvell C. D. (2016) - Managing marine disease emergencies in an era of rapid change. Philos. Trans. R. Soc. B: Biol. Sci. 371</bibl>
            <idno type="DOI">10.1098/rstb.2015.0364</idno>
          </bibl>
          <bibl n="102367">Casale, P. &amp;amp; Tucker, A.D. (2017). Caretta caretta (amended version of 2015 assessment). The IUCN Red List of Threatened Species 2017</bibl>
          <bibl n="101565">
            <bibl>Smyth, C.W., J.M. Sarmiento-Ram&amp;#237;rez, D.P.G. Short, J. Di&amp;#233;guez-Uribeondoid, K. O’donnell, and D.M. Geiser, 2019: Unraveling the ecology and epidemiology of an emerging fungal disease, sea turtle egg fusariosis (STEF). PLoS Pathogens 15</bibl>
            <idno type="DOI">10.1371/journal.ppat.1007682</idno>
          </bibl>
          <bibl n="101620">
            <bibl>Gleason F. H., Allerstorfer M., Lilje O. (2020) - Newly emerging diseases of marine turtles, especially sea turtle egg fusariosis (SEFT), caused by species in the Fusarium solani species complex (FSSC). Mycology 11, 184 - 194</bibl>
            <idno type="DOI">10.1080%2F21501203.2019.1710303</idno>
          </bibl>
          <bibl n="101334">
            <bibl>Sarmiento-Ram&amp;#237;rez J. M., Abella E., Mart&amp;#237;n M. P., Teller&amp;#237;a M. T., L&amp;#243;pez-Jurado L. F., Marco A., Di&amp;#233;guez-Uribeondo J. (2010) - Fusarium solani is responsible for mass mortalities in nests of loggerhead sea turtle, Caretta caretta, in Boavista, Cape Verde. FEMS Microbiol. Lett. 312, 192 – 200</bibl>
            <idno type="DOI">10.1111/j.1574-6968.2010.02116.x</idno>
          </bibl>
          <bibl n="101633">
            <bibl>Sarmiento-Ram&amp;#237;rez, J. M., Abella-P&amp;#233;rez E., Phillott A. D., Sim J., van West P., Mart&amp;#237;n M. P., Marco A., Di&amp;#233;guez-Uribeondo J. (2014): Global distribution of two fungal pathogens threatening endangered sea turtles. PLoS ONE 9</bibl>
            <idno type="DOI">10.1371/journal.pone.0085853</idno>
          </bibl>
          <bibl n="102104">
            <bibl>Phillott A. D., Parmenter C. J., McKillup S. C. (2006) - Calcium depletion of eggshell after fungal invasion of sea turtle eggs. Chelonian Conserv. Biol. 5, 146 - 149</bibl>
            <idno type="DOI">10.2744/1071-8443(2006)5[146:CDOEAF]2.0.CO;2</idno>
          </bibl>
          <bibl n="101480">
            <bibl>Baroncelli R., Sarrocco S., Zapparata A., Tavarini S., Angelini L. G., Vannacci G. (2015) - Characterization and epidemiology of Colletotrichum acutatum sensu lato (C. chrysanthemi) causing Carthamus tinctorius anthracnose. Plant Pathol. 64, 375 - 384</bibl>
            <idno type="DOI">10.1111/ppa.12268</idno>
          </bibl>
          <bibl n="101905">
            <bibl>Cobo-D&amp;#237;az J. F., Baroncelli R., Le Floch G., Picot A. (2019). A novel metabarcoding approach to investigate Fusarium species composition in soil and plant samples. FEMS Microbiol. Ecol. 95</bibl>
            <idno type="DOI">10.1093/femsec/fiz084</idno>
          </bibl>
          <bibl n="101997">
            <bibl>Katoh K., Misawa K., Kuma K. I., Miyata T. (2002). MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res., 30, 3059-  3066</bibl>
            <idno type="DOI">10.1093/nar/gkf436</idno>
          </bibl>
          <bibl n="102105">
            <bibl>Kumar, S., Stecher, G., Li, M., Knyaz, C., &amp;amp; Tamura, K. (2018). MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol. Biol. Evol. 35, 1547</bibl>
            <idno type="DOI">10.1093/molbev/msy096</idno>
          </bibl>
          <bibl n="102445">
            <bibl>Huelsenbeck, J. P., &amp;amp; Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754 - 755</bibl>
            <idno type="DOI">10.1093/bioinformatics/17.8.754</idno>
          </bibl>
          <bibl n="101738">
            <bibl>Candan A. Y., Katılmış Y., Ergin &amp;#199;. (2021). First report of Fusarium species occurrence in loggerhead sea turtle (Caretta caretta) nests and hatchling success in Iztuzu Beach, Turkey. Biologia, 76(2), 565-573</bibl>
            <idno type="DOI">10.2478/s11756-020-00553-4</idno>
          </bibl>
          <bibl n="101523">Felici L., Francesconi S., Balestra G. G., (2021). First report of Fusarium nodosum (L. Lombard &amp;amp; Crous) on durum wheat (Triticum turgidum subsp. durum) in Italy. Proceedings of the 26&amp;#176; SIPaV Congress, Virtual Congress, September 15-17, 2021</bibl>
        </listBibl>
      </div>
    </body>
  </text>
</TEI>